BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013H05LP1|AL426598
(852 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1578 1672 0.0
>3x_Contig1578
Length = 13178
Score = 1672 bits (843), Expect = 0.0
Identities = 851/853 (99%), Gaps = 1/853 (0%)
Strand = Plus / Plus
Query: 1 gatctgatttgatttaatttgatttgcagtttagagccaagataagacacgcgaagtgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5894 gatctgatttgatttaatttgatttgcagtttagagccaagataagacacgcgaagtgaa 5953
Query: 61 ataagcgcaggataaattttgatttgaaggggacaaaaagcagcacagtacttaagagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5954 ataagcgcaggataaattttgatttgaaggggacaaaaagcagcacagtacttaagagtg 6013
Query: 121 acatttcaggcgtttccgtatgcggtaacgcaatataattaagacatacctatagtatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6014 acatttcaggcgtttccgtatgcggtaacgcaatataattaagacatacctatagtatta 6073
Query: 181 gggaaaagcacgcgccttccccgctcataaatctctgtatggcgtas-ggaactttacat 239
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 6074 gggaaaagcacgcgccttccccgctcataaatctctgtatggcgtagcggaactttacat 6133
Query: 240 tgtttgaacaatttttttattccgtttagtatagagcctcacccctgggaacattctcta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6134 tgtttgaacaatttttttattccgtttagtatagagcctcacccctgggaacattctcta 6193
Query: 300 cagtaatgtgcatatttcagggggagctgatcttacattgagacaagacaagacaagata 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6194 cagtaatgtgcatatttcagggggagctgatcttacattgagacaagacaagacaagata 6253
Query: 360 tcgacacagaataatagcactttgtctattattctgtaggttgtttgacttgtttgacta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6254 tcgacacagaataatagcactttgtctattattctgtaggttgtttgacttgtttgacta 6313
Query: 420 ccgttaacaattgcttccgtttgacaagagactggtttcgggttgtcactgggttgagac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6314 ccgttaacaattgcttccgtttgacaagagactggtttcgggttgtcactgggttgagac 6373
Query: 480 ggcactgacacttggtttttgctttgatcgagcagacgttaatacgggcagcacggaaca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6374 ggcactgacacttggtttttgctttgatcgagcagacgttaatacgggcagcacggaaca 6433
Query: 540 atattactttgcttagagttgttagtagctgtgagtgatcttctgttatgttttgtattt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6434 atattactttgcttagagttgttagtagctgtgagtgatcttctgttatgttttgtattt 6493
Query: 600 ggtacgtcaatactatattctttcttttcgaaaaaaaaagggaagacacatatatcatct 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6494 ggtacgtcaatactatattctttcttttcgaaaaaaaaagggaagacacatatatcatct 6553
Query: 660 ctttacccaaaagggtaaagagttgttacagtagtcgtgtttgagcggagatcttaagga 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6554 ctttacccaaaagggtaaagagttgttacagtagtcgtgtttgagcggagatcttaagga 6613
Query: 720 tcaagctcccccctggcattacggggattcggagattacactggcgaattccatctttaa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6614 tcaagctcccccctggcattacggggattcggagattacactggcgaattccatctttaa 6673
Query: 780 cagcgatatacattcgtacagagtattatcctccaatattccgtatacactgtattctat 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6674 cagcgatatacattcgtacagagtattatcctccaatattccgtatacactgtattctat 6733
Query: 840 tcttttcaattac 852
|||||||||||||
Sbjct: 6734 tcttttcaattac 6746
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6472
Number of Sequences: 1807
Number of extensions: 6472
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 852
length of database: 10,358,551
effective HSP length: 16
effective length of query: 836
effective length of database: 10,329,639
effective search space: 8635578204
effective search space used: 8635578204
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)